DatasetGSEAinput_human1_collapsed_to_symbols.GSEAinput_human1.cls.txt
#B_versus_A.GSEAinput_human1.cls.txt
#B_versus_A_repos
PhenotypeGSEAinput_human1.cls.txt#B_versus_A_repos
Upregulated in classA
GeneSetGO_POSITIVE_REGULATION_OF_ALPHA_BETA_T_CELL_DIFFERENTIATION
Enrichment Score (ES)-0.6010937
Normalized Enrichment Score (NES)-2.0029535
Nominal p-value0.0
FDR q-value0.0580697
FWER p-Value0.168
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO_POSITIVE_REGULATION_OF_ALPHA_BETA_T_CELL_DIFFERENTIATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TGFBR2transforming growth factor beta receptor 2 [Source:HGNC Symbol;Acc:HGNC:11773]TGFBR2
Entrez,  Source
transforming growth factor beta receptor 2 [Source:HGNC Symbol;Acc:HGNC:11773]5201.180-0.0010No
2PRKCZprotein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]PRKCZ
Entrez,  Source
protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]18020.616-0.0817No
3HLXH2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]HLX
Entrez,  Source
H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]18410.604-0.0640No
4SYKspleen associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11491]SYK
Entrez,  Source
spleen associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11491]27560.412-0.1226No
5ZAP70zeta chain of T cell receptor associated protein kinase 70 [Source:HGNC Symbol;Acc:HGNC:12858]ZAP70
Entrez,  Source
zeta chain of T cell receptor associated protein kinase 70 [Source:HGNC Symbol;Acc:HGNC:12858]30850.354-0.1365No
6RARAretinoic acid receptor alpha [Source:HGNC Symbol;Acc:HGNC:9864]RARA
Entrez,  Source
retinoic acid receptor alpha [Source:HGNC Symbol;Acc:HGNC:9864]36470.261-0.1722No
7PNPpurine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]PNP
Entrez,  Source
purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]39670.216-0.1901No
8NKAPNFKB activating protein [Source:HGNC Symbol;Acc:HGNC:29873]NKAP
Entrez,  Source
NFKB activating protein [Source:HGNC Symbol;Acc:HGNC:29873]42760.174-0.2086No
9TNFSF4TNF superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:11934]TNFSF4
Entrez,  Source
TNF superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:11934]46550.122-0.2345No
10ZBTB7Bzinc finger and BTB domain containing 7B [Source:HGNC Symbol;Acc:HGNC:18668]ZBTB7B
Entrez,  Source
zinc finger and BTB domain containing 7B [Source:HGNC Symbol;Acc:HGNC:18668]52610.050-0.2808No
11SHHsonic hedgehog signaling molecule [Source:HGNC Symbol;Acc:HGNC:10848]SHH
Entrez,  Source
sonic hedgehog signaling molecule [Source:HGNC Symbol;Acc:HGNC:10848]5906-0.005-0.3318No
12ITPKBinositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]ITPKB
Entrez,  Source
inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]6811-0.094-0.4004No
13AP3D1adaptor related protein complex 3 subunit delta 1 [Source:HGNC Symbol;Acc:HGNC:568]AP3D1
Entrez,  Source
adaptor related protein complex 3 subunit delta 1 [Source:HGNC Symbol;Acc:HGNC:568]7528-0.179-0.4511No
14IL4Rinterleukin 4 receptor [Source:HGNC Symbol;Acc:HGNC:6015]IL4R
Entrez,  Source
interleukin 4 receptor [Source:HGNC Symbol;Acc:HGNC:6015]7718-0.200-0.4593No
15SASH3SAM and SH3 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15975]SASH3
Entrez,  Source
SAM and SH3 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15975]7746-0.203-0.4545No
16AP3B1adaptor related protein complex 3 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:566]AP3B1
Entrez,  Source
adaptor related protein complex 3 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:566]7836-0.215-0.4542No
17FOXP3forkhead box P3 [Source:HGNC Symbol;Acc:HGNC:6106]FOXP3
Entrez,  Source
forkhead box P3 [Source:HGNC Symbol;Acc:HGNC:6106]8747-0.336-0.5150No
18NCKAP1LNCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]NCKAP1L
Entrez,  Source
NCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]9393-0.430-0.5515No
19SOCS5suppressor of cytokine signaling 5 [Source:HGNC Symbol;Acc:HGNC:16852]SOCS5
Entrez,  Source
suppressor of cytokine signaling 5 [Source:HGNC Symbol;Acc:HGNC:16852]10018-0.528-0.5831Yes
20RHOAras homolog family member A [Source:HGNC Symbol;Acc:HGNC:667]RHOA
Entrez,  Source
ras homolog family member A [Source:HGNC Symbol;Acc:HGNC:667]10057-0.535-0.5678Yes
21ADAadenosine deaminase [Source:HGNC Symbol;Acc:HGNC:186]ADA
Entrez,  Source
adenosine deaminase [Source:HGNC Symbol;Acc:HGNC:186]10309-0.576-0.5681Yes
22CBFBcore-binding factor subunit beta [Source:HGNC Symbol;Acc:HGNC:1539]CBFB
Entrez,  Source
core-binding factor subunit beta [Source:HGNC Symbol;Acc:HGNC:1539]10326-0.578-0.5496Yes
23IL18interleukin 18 [Source:HGNC Symbol;Acc:HGNC:5986]IL18
Entrez,  Source
interleukin 18 [Source:HGNC Symbol;Acc:HGNC:5986]10363-0.584-0.5325Yes
24IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]IL23A
Entrez,  Source
interleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]11016-0.732-0.5592Yes
25RUNX1RUNX family transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10471]RUNX1
Entrez,  Source
RUNX family transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10471]11105-0.755-0.5404Yes
26NFKBIDNFKB inhibitor delta [Source:HGNC Symbol;Acc:HGNC:15671]NFKBID
Entrez,  Source
NFKB inhibitor delta [Source:HGNC Symbol;Acc:HGNC:15671]11518-0.884-0.5429Yes
27MALT1MALT1 paracaspase [Source:HGNC Symbol;Acc:HGNC:6819]MALT1
Entrez,  Source
MALT1 paracaspase [Source:HGNC Symbol;Acc:HGNC:6819]11818-1.013-0.5321Yes
28IL12RB1interleukin 12 receptor subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:5971]IL12RB1
Entrez,  Source
interleukin 12 receptor subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:5971]11862-1.034-0.5001Yes
29ZBTB16zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]ZBTB16
Entrez,  Source
zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]11884-1.048-0.4660Yes
30SOCS1suppressor of cytokine signaling 1 [Source:HGNC Symbol;Acc:HGNC:19383]SOCS1
Entrez,  Source
suppressor of cytokine signaling 1 [Source:HGNC Symbol;Acc:HGNC:19383]11885-1.048-0.4302Yes
31LGALS9galectin 9 [Source:HGNC Symbol;Acc:HGNC:6570]LGALS9
Entrez,  Source
galectin 9 [Source:HGNC Symbol;Acc:HGNC:6570]11910-1.063-0.3958Yes
32RUNX3RUNX family transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]RUNX3
Entrez,  Source
RUNX family transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]12025-1.137-0.3660Yes
33CD86CD86 molecule [Source:HGNC Symbol;Acc:HGNC:1705]CD86
Entrez,  Source
CD86 molecule [Source:HGNC Symbol;Acc:HGNC:1705]12204-1.264-0.3369Yes
34ANXA1annexin A1 [Source:HGNC Symbol;Acc:HGNC:533]ANXA1
Entrez,  Source
annexin A1 [Source:HGNC Symbol;Acc:HGNC:533]12244-1.300-0.2956Yes
35IFNGinterferon gamma [Source:HGNC Symbol;Acc:HGNC:5438]IFNG
Entrez,  Source
interferon gamma [Source:HGNC Symbol;Acc:HGNC:5438]12392-1.473-0.2569Yes
36CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]CD83
Entrez,  Source
CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]12405-1.490-0.2069Yes
37NLRP3NLR family pyrin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16400]NLRP3
Entrez,  Source
NLR family pyrin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16400]12530-1.787-0.1557Yes
38RIPK2receptor interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:10020]RIPK2
Entrez,  Source
receptor interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:10020]12580-2.149-0.0862Yes
39NFKBIZNFKB inhibitor zeta [Source:HGNC Symbol;Acc:HGNC:29805]NFKBIZ
Entrez,  Source
NFKB inhibitor zeta [Source:HGNC Symbol;Acc:HGNC:29805]12605-2.6330.0019Yes
Table: GSEA details [plain text format]



Fig 2: GO_POSITIVE_REGULATION_OF_ALPHA_BETA_T_CELL_DIFFERENTIATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO_POSITIVE_REGULATION_OF_ALPHA_BETA_T_CELL_DIFFERENTIATION: Random ES distribution   
Gene set null distribution of ES for GO_POSITIVE_REGULATION_OF_ALPHA_BETA_T_CELL_DIFFERENTIATION