DatasetGSEAinput_human1_collapsed_to_symbols.GSEAinput_human1.cls.txt
#B_versus_A.GSEAinput_human1.cls.txt
#B_versus_A_repos
PhenotypeGSEAinput_human1.cls.txt#B_versus_A_repos
Upregulated in classA
GeneSetGO_POSITIVE_REGULATION_OF_CD4_POSITIVE_ALPHA_BETA_T_CELL_ACTIVATION
Enrichment Score (ES)-0.6053387
Normalized Enrichment Score (NES)-1.950265
Nominal p-value0.0
FDR q-value0.05789638
FWER p-Value0.335
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO_POSITIVE_REGULATION_OF_CD4_POSITIVE_ALPHA_BETA_T_CELL_ACTIVATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TGFBR2transforming growth factor beta receptor 2 [Source:HGNC Symbol;Acc:HGNC:11773]TGFBR2
Entrez,  Source
transforming growth factor beta receptor 2 [Source:HGNC Symbol;Acc:HGNC:11773]5201.1800.0064No
2PRKCZprotein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]PRKCZ
Entrez,  Source
protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]18020.616-0.0703No
3HLXH2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]HLX
Entrez,  Source
H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]18410.604-0.0490No
4CD160CD160 molecule [Source:HGNC Symbol;Acc:HGNC:17013]CD160
Entrez,  Source
CD160 molecule [Source:HGNC Symbol;Acc:HGNC:17013]26550.434-0.0959No
5RARAretinoic acid receptor alpha [Source:HGNC Symbol;Acc:HGNC:9864]RARA
Entrez,  Source
retinoic acid receptor alpha [Source:HGNC Symbol;Acc:HGNC:9864]36470.261-0.1641No
6TNFSF4TNF superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:11934]TNFSF4
Entrez,  Source
TNF superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:11934]46550.122-0.2390No
7ZBTB7Bzinc finger and BTB domain containing 7B [Source:HGNC Symbol;Acc:HGNC:18668]ZBTB7B
Entrez,  Source
zinc finger and BTB domain containing 7B [Source:HGNC Symbol;Acc:HGNC:18668]52610.050-0.2850No
8XCL1X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:10645]XCL1
Entrez,  Source
X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:10645]6056-0.018-0.3473No
9IL4Rinterleukin 4 receptor [Source:HGNC Symbol;Acc:HGNC:6015]IL4R
Entrez,  Source
interleukin 4 receptor [Source:HGNC Symbol;Acc:HGNC:6015]7718-0.200-0.4711No
10SASH3SAM and SH3 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15975]SASH3
Entrez,  Source
SAM and SH3 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15975]7746-0.203-0.4650No
11PRKCQprotein kinase C theta [Source:HGNC Symbol;Acc:HGNC:9410]PRKCQ
Entrez,  Source
protein kinase C theta [Source:HGNC Symbol;Acc:HGNC:9410]8526-0.306-0.5145No
12FOXP3forkhead box P3 [Source:HGNC Symbol;Acc:HGNC:6106]FOXP3
Entrez,  Source
forkhead box P3 [Source:HGNC Symbol;Acc:HGNC:6106]8747-0.336-0.5183No
13NCKAP1LNCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]NCKAP1L
Entrez,  Source
NCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]9393-0.430-0.5521No
14CD81CD81 molecule [Source:HGNC Symbol;Acc:HGNC:1701]CD81
Entrez,  Source
CD81 molecule [Source:HGNC Symbol;Acc:HGNC:1701]9686-0.477-0.5560No
15CD55CD55 molecule (Cromer blood group) [Source:HGNC Symbol;Acc:HGNC:2665]CD55
Entrez,  Source
CD55 molecule (Cromer blood group) [Source:HGNC Symbol;Acc:HGNC:2665]9993-0.524-0.5591No
16SOCS5suppressor of cytokine signaling 5 [Source:HGNC Symbol;Acc:HGNC:16852]SOCS5
Entrez,  Source
suppressor of cytokine signaling 5 [Source:HGNC Symbol;Acc:HGNC:16852]10018-0.528-0.5397No
17IL18interleukin 18 [Source:HGNC Symbol;Acc:HGNC:5986]IL18
Entrez,  Source
interleukin 18 [Source:HGNC Symbol;Acc:HGNC:5986]10363-0.584-0.5434No
18IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]IL23A
Entrez,  Source
interleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]11016-0.732-0.5656No
19NFKBIDNFKB inhibitor delta [Source:HGNC Symbol;Acc:HGNC:15671]NFKBID
Entrez,  Source
NFKB inhibitor delta [Source:HGNC Symbol;Acc:HGNC:15671]11518-0.884-0.5696Yes
20MALT1MALT1 paracaspase [Source:HGNC Symbol;Acc:HGNC:6819]MALT1
Entrez,  Source
MALT1 paracaspase [Source:HGNC Symbol;Acc:HGNC:6819]11818-1.013-0.5524Yes
21IL12RB1interleukin 12 receptor subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:5971]IL12RB1
Entrez,  Source
interleukin 12 receptor subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:5971]11862-1.034-0.5140Yes
22SOCS1suppressor of cytokine signaling 1 [Source:HGNC Symbol;Acc:HGNC:19383]SOCS1
Entrez,  Source
suppressor of cytokine signaling 1 [Source:HGNC Symbol;Acc:HGNC:19383]11885-1.048-0.4734Yes
23LGALS9galectin 9 [Source:HGNC Symbol;Acc:HGNC:6570]LGALS9
Entrez,  Source
galectin 9 [Source:HGNC Symbol;Acc:HGNC:6570]11910-1.063-0.4324Yes
24CD86CD86 molecule [Source:HGNC Symbol;Acc:HGNC:1705]CD86
Entrez,  Source
CD86 molecule [Source:HGNC Symbol;Acc:HGNC:1705]12204-1.264-0.4046Yes
25ANXA1annexin A1 [Source:HGNC Symbol;Acc:HGNC:533]ANXA1
Entrez,  Source
annexin A1 [Source:HGNC Symbol;Acc:HGNC:533]12244-1.300-0.3551Yes
26IFNGinterferon gamma [Source:HGNC Symbol;Acc:HGNC:5438]IFNG
Entrez,  Source
interferon gamma [Source:HGNC Symbol;Acc:HGNC:5438]12392-1.473-0.3072Yes
27CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]CD83
Entrez,  Source
CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]12405-1.490-0.2479Yes
28NLRP3NLR family pyrin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16400]NLRP3
Entrez,  Source
NLR family pyrin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16400]12530-1.787-0.1856Yes
29RIPK2receptor interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:10020]RIPK2
Entrez,  Source
receptor interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:10020]12580-2.149-0.1026Yes
30NFKBIZNFKB inhibitor zeta [Source:HGNC Symbol;Acc:HGNC:29805]NFKBIZ
Entrez,  Source
NFKB inhibitor zeta [Source:HGNC Symbol;Acc:HGNC:29805]12605-2.6330.0019Yes
Table: GSEA details [plain text format]



Fig 2: GO_POSITIVE_REGULATION_OF_CD4_POSITIVE_ALPHA_BETA_T_CELL_ACTIVATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO_POSITIVE_REGULATION_OF_CD4_POSITIVE_ALPHA_BETA_T_CELL_ACTIVATION: Random ES distribution   
Gene set null distribution of ES for GO_POSITIVE_REGULATION_OF_CD4_POSITIVE_ALPHA_BETA_T_CELL_ACTIVATION