DatasetGSEAinput_human1_collapsed_to_symbols.GSEAinput_human1.cls.txt
#B_versus_A.GSEAinput_human1.cls.txt
#B_versus_A_repos
PhenotypeGSEAinput_human1.cls.txt#B_versus_A_repos
Upregulated in classA
GeneSetGO_REGULATION_OF_TISSUE_REMODELING
Enrichment Score (ES)-0.61354244
Normalized Enrichment Score (NES)-2.0678697
Nominal p-value0.0
FDR q-value0.016172424
FWER p-Value0.047
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO_REGULATION_OF_TISSUE_REMODELING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]ADAM8
Entrez,  Source
ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]4051.3030.0203No
2SPP1secreted phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:11255]SPP1
Entrez,  Source
secreted phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:11255]22910.507-0.1091No
3CSKC-terminal Src kinase [Source:HGNC Symbol;Acc:HGNC:2444]CSK
Entrez,  Source
C-terminal Src kinase [Source:HGNC Symbol;Acc:HGNC:2444]24430.474-0.1020No
4SYKspleen associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11491]SYK
Entrez,  Source
spleen associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11491]27560.412-0.1102No
5ABRABR activator of RhoGEF and GTPase [Source:HGNC Symbol;Acc:HGNC:81]ABR
Entrez,  Source
ABR activator of RhoGEF and GTPase [Source:HGNC Symbol;Acc:HGNC:81]31400.342-0.1268No
6UBASH3Bubiquitin associated and SH3 domain containing B [Source:HGNC Symbol;Acc:HGNC:29884]UBASH3B
Entrez,  Source
ubiquitin associated and SH3 domain containing B [Source:HGNC Symbol;Acc:HGNC:29884]33940.301-0.1348No
7S1PR1sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]S1PR1
Entrez,  Source
sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]35100.281-0.1327No
8VDRvitamin D receptor [Source:HGNC Symbol;Acc:HGNC:12679]VDR
Entrez,  Source
vitamin D receptor [Source:HGNC Symbol;Acc:HGNC:12679]49290.087-0.2418No
9LEPRleptin receptor [Source:HGNC Symbol;Acc:HGNC:6554]LEPR
Entrez,  Source
leptin receptor [Source:HGNC Symbol;Acc:HGNC:6554]52090.056-0.2617No
10NF1neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]NF1
Entrez,  Source
neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]57400.000-0.3037No
11GREM1"gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]"GREM1
Entrez,  Source
"gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]"5911-0.005-0.3170No
12TNFRSF11BTNF receptor superfamily member 11b [Source:HGNC Symbol;Acc:HGNC:11909]TNFRSF11B
Entrez,  Source
TNF receptor superfamily member 11b [Source:HGNC Symbol;Acc:HGNC:11909]6017-0.014-0.3248No
13TMEM64transmembrane protein 64 [Source:HGNC Symbol;Acc:HGNC:25441]TMEM64
Entrez,  Source
transmembrane protein 64 [Source:HGNC Symbol;Acc:HGNC:25441]6506-0.060-0.3612No
14GJA1gap junction protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:4274]GJA1
Entrez,  Source
gap junction protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:4274]6700-0.082-0.3732No
15CD38CD38 molecule [Source:HGNC Symbol;Acc:HGNC:1667]CD38
Entrez,  Source
CD38 molecule [Source:HGNC Symbol;Acc:HGNC:1667]6987-0.113-0.3914No
16CA2carbonic anhydrase 2 [Source:HGNC Symbol;Acc:HGNC:1373]CA2
Entrez,  Source
carbonic anhydrase 2 [Source:HGNC Symbol;Acc:HGNC:1373]7294-0.153-0.4095No
17INPP5Dinositol polyphosphate-5-phosphatase D [Source:HGNC Symbol;Acc:HGNC:6079]INPP5D
Entrez,  Source
inositol polyphosphate-5-phosphatase D [Source:HGNC Symbol;Acc:HGNC:6079]7367-0.161-0.4088No
18BAX"BCL2 associated X, apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:959]"BAX
Entrez,  Source
"BCL2 associated X, apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:959]"7792-0.208-0.4341No
19LRP5LDL receptor related protein 5 [Source:HGNC Symbol;Acc:HGNC:6697]LRP5
Entrez,  Source
LDL receptor related protein 5 [Source:HGNC Symbol;Acc:HGNC:6697]8177-0.255-0.4543No
20ITGB3integrin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6156]ITGB3
Entrez,  Source
integrin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6156]8593-0.315-0.4746No
21TMBIM1transmembrane BAX inhibitor motif containing 1 [Source:HGNC Symbol;Acc:HGNC:23410]TMBIM1
Entrez,  Source
transmembrane BAX inhibitor motif containing 1 [Source:HGNC Symbol;Acc:HGNC:23410]10344-0.580-0.5902Yes
22IL18interleukin 18 [Source:HGNC Symbol;Acc:HGNC:5986]IL18
Entrez,  Source
interleukin 18 [Source:HGNC Symbol;Acc:HGNC:5986]10363-0.584-0.5681Yes
23ATP6AP1ATPase H+ transporting accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:868]ATP6AP1
Entrez,  Source
ATPase H+ transporting accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:868]10479-0.609-0.5528Yes
24BCRBCR activator of RhoGEF and GTPase [Source:HGNC Symbol;Acc:HGNC:1014]BCR
Entrez,  Source
BCR activator of RhoGEF and GTPase [Source:HGNC Symbol;Acc:HGNC:1014]10577-0.631-0.5350Yes
25PTGER4prostaglandin E receptor 4 [Source:HGNC Symbol;Acc:HGNC:9596]PTGER4
Entrez,  Source
prostaglandin E receptor 4 [Source:HGNC Symbol;Acc:HGNC:9596]10838-0.691-0.5279Yes
26PDK4pyruvate dehydrogenase kinase 4 [Source:HGNC Symbol;Acc:HGNC:8812]PDK4
Entrez,  Source
pyruvate dehydrogenase kinase 4 [Source:HGNC Symbol;Acc:HGNC:8812]10873-0.698-0.5025Yes
27SIGLEC15sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]SIGLEC15
Entrez,  Source
sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]10919-0.709-0.4776Yes
28IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]IL23A
Entrez,  Source
interleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]11016-0.732-0.4557Yes
29P2RX7purinergic receptor P2X 7 [Source:HGNC Symbol;Acc:HGNC:8537]P2RX7
Entrez,  Source
purinergic receptor P2X 7 [Source:HGNC Symbol;Acc:HGNC:8537]11024-0.733-0.4268Yes
30CSF1Rcolony stimulating factor 1 receptor [Source:HGNC Symbol;Acc:HGNC:2433]CSF1R
Entrez,  Source
colony stimulating factor 1 receptor [Source:HGNC Symbol;Acc:HGNC:2433]11192-0.777-0.4088Yes
31TFRCtransferrin receptor [Source:HGNC Symbol;Acc:HGNC:11763]TFRC
Entrez,  Source
transferrin receptor [Source:HGNC Symbol;Acc:HGNC:11763]11556-0.896-0.4015Yes
32B4GALT1"beta-1,4-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:924]"B4GALT1
Entrez,  Source
"beta-1,4-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:924]"11678-0.955-0.3727Yes
33TGFB1transforming growth factor beta 1 [Source:HGNC Symbol;Acc:HGNC:11766]TGFB1
Entrez,  Source
transforming growth factor beta 1 [Source:HGNC Symbol;Acc:HGNC:11766]11951-1.091-0.3504Yes
34PMLpromyelocytic leukemia [Source:HGNC Symbol;Acc:HGNC:9113]PML
Entrez,  Source
promyelocytic leukemia [Source:HGNC Symbol;Acc:HGNC:9113]12094-1.182-0.3141Yes
35SRC"SRC proto-oncogene, non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11283]"SRC
Entrez,  Source
"SRC proto-oncogene, non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11283]"12336-1.387-0.2775Yes
36CST3cystatin C [Source:HGNC Symbol;Acc:HGNC:2475]CST3
Entrez,  Source
cystatin C [Source:HGNC Symbol;Acc:HGNC:2475]12424-1.520-0.2232Yes
37IL15interleukin 15 [Source:HGNC Symbol;Acc:HGNC:5977]IL15
Entrez,  Source
interleukin 15 [Source:HGNC Symbol;Acc:HGNC:5977]12506-1.720-0.1604Yes
38TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]TNFAIP3
Entrez,  Source
TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]12626-4.2270.0002Yes
Table: GSEA details [plain text format]



Fig 2: GO_REGULATION_OF_TISSUE_REMODELING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO_REGULATION_OF_TISSUE_REMODELING: Random ES distribution   
Gene set null distribution of ES for GO_REGULATION_OF_TISSUE_REMODELING