DatasetGSEAinput_human1_collapsed_to_symbols.GSEAinput_human1.cls.txt
#B_versus_A.GSEAinput_human1.cls.txt
#B_versus_A_repos
PhenotypeGSEAinput_human1.cls.txt#B_versus_A_repos
Upregulated in classA
GeneSetGO_CIRCADIAN_REGULATION_OF_GENE_EXPRESSION
Enrichment Score (ES)-0.5655199
Normalized Enrichment Score (NES)-1.9888123
Nominal p-value0.0
FDR q-value0.03158056
FWER p-Value0.175
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO_CIRCADIAN_REGULATION_OF_GENE_EXPRESSION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RBM4BRNA binding motif protein 4B [Source:HGNC Symbol;Acc:HGNC:28842]RBM4B
Entrez,  Source
RNA binding motif protein 4B [Source:HGNC Symbol;Acc:HGNC:28842]3611.3450.0152No
2NAMPTnicotinamide phosphoribosyltransferase [Source:HGNC Symbol;Acc:HGNC:30092]NAMPT
Entrez,  Source
nicotinamide phosphoribosyltransferase [Source:HGNC Symbol;Acc:HGNC:30092]14110.729-0.0443No
3OGTO-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]OGT
Entrez,  Source
O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]23110.502-0.0994No
4PPP1CAprotein phosphatase 1 catalytic subunit alpha [Source:HGNC Symbol;Acc:HGNC:9281]PPP1CA
Entrez,  Source
protein phosphatase 1 catalytic subunit alpha [Source:HGNC Symbol;Acc:HGNC:9281]26360.437-0.1109No
5TOP1DNA topoisomerase I [Source:HGNC Symbol;Acc:HGNC:11986]TOP1
Entrez,  Source
DNA topoisomerase I [Source:HGNC Symbol;Acc:HGNC:11986]26950.425-0.1016No
6HDAC2histone deacetylase 2 [Source:HGNC Symbol;Acc:HGNC:4853]HDAC2
Entrez,  Source
histone deacetylase 2 [Source:HGNC Symbol;Acc:HGNC:4853]27270.418-0.0904No
7NPAS2neuronal PAS domain protein 2 [Source:HGNC Symbol;Acc:HGNC:7895]NPAS2
Entrez,  Source
neuronal PAS domain protein 2 [Source:HGNC Symbol;Acc:HGNC:7895]32550.323-0.1217No
8HDAC1histone deacetylase 1 [Source:HGNC Symbol;Acc:HGNC:4852]HDAC1
Entrez,  Source
histone deacetylase 1 [Source:HGNC Symbol;Acc:HGNC:4852]38010.239-0.1573No
9NCOA2nuclear receptor coactivator 2 [Source:HGNC Symbol;Acc:HGNC:7669]NCOA2
Entrez,  Source
nuclear receptor coactivator 2 [Source:HGNC Symbol;Acc:HGNC:7669]38280.235-0.1517No
10SIRT1sirtuin 1 [Source:HGNC Symbol;Acc:HGNC:14929]SIRT1
Entrez,  Source
sirtuin 1 [Source:HGNC Symbol;Acc:HGNC:14929]39810.214-0.1568No
11BHLHE41basic helix-loop-helix family member e41 [Source:HGNC Symbol;Acc:HGNC:16617]BHLHE41
Entrez,  Source
basic helix-loop-helix family member e41 [Source:HGNC Symbol;Acc:HGNC:16617]42630.176-0.1734No
12PPP1CBprotein phosphatase 1 catalytic subunit beta [Source:HGNC Symbol;Acc:HGNC:9282]PPP1CB
Entrez,  Source
protein phosphatase 1 catalytic subunit beta [Source:HGNC Symbol;Acc:HGNC:9282]42860.174-0.1694No
13KDM5Alysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]KDM5A
Entrez,  Source
lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]44240.151-0.1754No
14PRMT5protein arginine methyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:10894]PRMT5
Entrez,  Source
protein arginine methyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:10894]48250.100-0.2039No
15LGR4leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]LGR4
Entrez,  Source
leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]50990.067-0.2234No
16ZFHX3zinc finger homeobox 3 [Source:HGNC Symbol;Acc:HGNC:777]ZFHX3
Entrez,  Source
zinc finger homeobox 3 [Source:HGNC Symbol;Acc:HGNC:777]52550.051-0.2341No
17PPARGC1APPARG coactivator 1 alpha [Source:HGNC Symbol;Acc:HGNC:9237]PPARGC1A
Entrez,  Source
PPARG coactivator 1 alpha [Source:HGNC Symbol;Acc:HGNC:9237]56810.007-0.2676No
18RORCRAR related orphan receptor C [Source:HGNC Symbol;Acc:HGNC:10260]RORC
Entrez,  Source
RAR related orphan receptor C [Source:HGNC Symbol;Acc:HGNC:10260]5970-0.010-0.2902No
19ARNTLaryl hydrocarbon receptor nuclear translocator like [Source:HGNC Symbol;Acc:HGNC:701]ARNTL
Entrez,  Source
aryl hydrocarbon receptor nuclear translocator like [Source:HGNC Symbol;Acc:HGNC:701]6011-0.014-0.2929No
20CLOCKclock circadian regulator [Source:HGNC Symbol;Acc:HGNC:2082]CLOCK
Entrez,  Source
clock circadian regulator [Source:HGNC Symbol;Acc:HGNC:2082]6185-0.029-0.3057No
21HNF1BHNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]HNF1B
Entrez,  Source
HNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]6546-0.065-0.3322No
22CSNK1Dcasein kinase 1 delta [Source:HGNC Symbol;Acc:HGNC:2452]CSNK1D
Entrez,  Source
casein kinase 1 delta [Source:HGNC Symbol;Acc:HGNC:2452]7129-0.132-0.3741No
23HNRNPUheterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]HNRNPU
Entrez,  Source
heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]7219-0.144-0.3765No
24PPARAperoxisome proliferator activated receptor alpha [Source:HGNC Symbol;Acc:HGNC:9232]PPARA
Entrez,  Source
peroxisome proliferator activated receptor alpha [Source:HGNC Symbol;Acc:HGNC:9232]8612-0.318-0.4767No
25PPP1CCprotein phosphatase 1 catalytic subunit gamma [Source:HGNC Symbol;Acc:HGNC:9283]PPP1CC
Entrez,  Source
protein phosphatase 1 catalytic subunit gamma [Source:HGNC Symbol;Acc:HGNC:9283]9216-0.402-0.5115No
26MAGED1MAGE family member D1 [Source:HGNC Symbol;Acc:HGNC:6813]MAGED1
Entrez,  Source
MAGE family member D1 [Source:HGNC Symbol;Acc:HGNC:6813]9865-0.503-0.5466No
27RAI1retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]RAI1
Entrez,  Source
retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]10067-0.535-0.5451No
28MYBBP1AMYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]MYBBP1A
Entrez,  Source
MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]10325-0.578-0.5466Yes
29GFPT1glutamine--fructose-6-phosphate transaminase 1 [Source:HGNC Symbol;Acc:HGNC:4241]GFPT1
Entrez,  Source
glutamine--fructose-6-phosphate transaminase 1 [Source:HGNC Symbol;Acc:HGNC:4241]10342-0.580-0.5290Yes
30AHRaryl hydrocarbon receptor [Source:HGNC Symbol;Acc:HGNC:348]AHR
Entrez,  Source
aryl hydrocarbon receptor [Source:HGNC Symbol;Acc:HGNC:348]10573-0.630-0.5267Yes
31PER2period circadian regulator 2 [Source:HGNC Symbol;Acc:HGNC:8846]PER2
Entrez,  Source
period circadian regulator 2 [Source:HGNC Symbol;Acc:HGNC:8846]10634-0.647-0.5103Yes
32RORARAR related orphan receptor A [Source:HGNC Symbol;Acc:HGNC:10258]RORA
Entrez,  Source
RAR related orphan receptor A [Source:HGNC Symbol;Acc:HGNC:10258]10716-0.663-0.4951Yes
33CRY2cryptochrome circadian regulator 2 [Source:HGNC Symbol;Acc:HGNC:2385]CRY2
Entrez,  Source
cryptochrome circadian regulator 2 [Source:HGNC Symbol;Acc:HGNC:2385]11178-0.773-0.5065Yes
34RELB"RELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]"RELB
Entrez,  Source
"RELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]"11279-0.804-0.4882Yes
35CSNK1Ecasein kinase 1 epsilon [Source:HGNC Symbol;Acc:HGNC:2453]CSNK1E
Entrez,  Source
casein kinase 1 epsilon [Source:HGNC Symbol;Acc:HGNC:2453]11411-0.845-0.4710Yes
36ADKadenosine kinase [Source:HGNC Symbol;Acc:HGNC:257]ADK
Entrez,  Source
adenosine kinase [Source:HGNC Symbol;Acc:HGNC:257]11770-0.989-0.4671Yes
37CRY1cryptochrome circadian regulator 1 [Source:HGNC Symbol;Acc:HGNC:2384]CRY1
Entrez,  Source
cryptochrome circadian regulator 1 [Source:HGNC Symbol;Acc:HGNC:2384]11961-1.098-0.4464Yes
38MTA1metastasis associated 1 [Source:HGNC Symbol;Acc:HGNC:7410]MTA1
Entrez,  Source
metastasis associated 1 [Source:HGNC Symbol;Acc:HGNC:7410]11997-1.117-0.4127Yes
39PMLpromyelocytic leukemia [Source:HGNC Symbol;Acc:HGNC:9113]PML
Entrez,  Source
promyelocytic leukemia [Source:HGNC Symbol;Acc:HGNC:9113]12094-1.182-0.3817Yes
40BHLHE40basic helix-loop-helix family member e40 [Source:HGNC Symbol;Acc:HGNC:1046]BHLHE40
Entrez,  Source
basic helix-loop-helix family member e40 [Source:HGNC Symbol;Acc:HGNC:1046]12260-1.312-0.3520Yes
41ID2inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]ID2
Entrez,  Source
inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]12273-1.322-0.3098Yes
42CREMcAMP responsive element modulator [Source:HGNC Symbol;Acc:HGNC:2352]CREM
Entrez,  Source
cAMP responsive element modulator [Source:HGNC Symbol;Acc:HGNC:2352]12325-1.369-0.2691Yes
43ATF4activating transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:786]ATF4
Entrez,  Source
activating transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:786]12368-1.434-0.2256Yes
44NRIP1nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]NRIP1
Entrez,  Source
nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]12473-1.618-0.1811Yes
45NR1D1nuclear receptor subfamily 1 group D member 1 [Source:HGNC Symbol;Acc:HGNC:7962]NR1D1
Entrez,  Source
nuclear receptor subfamily 1 group D member 1 [Source:HGNC Symbol;Acc:HGNC:7962]12495-1.672-0.1281Yes
46PER1period circadian regulator 1 [Source:HGNC Symbol;Acc:HGNC:8845]PER1
Entrez,  Source
period circadian regulator 1 [Source:HGNC Symbol;Acc:HGNC:8845]12627-4.2480.0002Yes
Table: GSEA details [plain text format]



Fig 2: GO_CIRCADIAN_REGULATION_OF_GENE_EXPRESSION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO_CIRCADIAN_REGULATION_OF_GENE_EXPRESSION: Random ES distribution   
Gene set null distribution of ES for GO_CIRCADIAN_REGULATION_OF_GENE_EXPRESSION