DatasetGSEAinput_human1_collapsed_to_symbols.GSEAinput_human1.cls.txt
#B_versus_A.GSEAinput_human1.cls.txt
#B_versus_A_repos
PhenotypeGSEAinput_human1.cls.txt#B_versus_A_repos
Upregulated in classA
GeneSetGO_MAMMARY_GLAND_EPITHELIUM_DEVELOPMENT
Enrichment Score (ES)-0.59710634
Normalized Enrichment Score (NES)-1.9670659
Nominal p-value0.0
FDR q-value0.035147954
FWER p-Value0.235
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO_MAMMARY_GLAND_EPITHELIUM_DEVELOPMENT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MAPK1mitogen-activated protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:6871]MAPK1
Entrez,  Source
mitogen-activated protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:6871]10100.888-0.0286No
2STAT6signal transducer and activator of transcription 6 [Source:HGNC Symbol;Acc:HGNC:11368]STAT6
Entrez,  Source
signal transducer and activator of transcription 6 [Source:HGNC Symbol;Acc:HGNC:11368]15990.669-0.0365No
3PTCH1patched 1 [Source:HGNC Symbol;Acc:HGNC:9585]PTCH1
Entrez,  Source
patched 1 [Source:HGNC Symbol;Acc:HGNC:9585]17100.641-0.0080No
4SCRIBscribble planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:30377]SCRIB
Entrez,  Source
scribble planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:30377]39830.213-0.1760No
5KDM5Blysine demethylase 5B [Source:HGNC Symbol;Acc:HGNC:18039]KDM5B
Entrez,  Source
lysine demethylase 5B [Source:HGNC Symbol;Acc:HGNC:18039]42730.175-0.1888No
6DDR1discoidin domain receptor tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:2730]DDR1
Entrez,  Source
discoidin domain receptor tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:2730]44330.150-0.1927No
7VDRvitamin D receptor [Source:HGNC Symbol;Acc:HGNC:12679]VDR
Entrez,  Source
vitamin D receptor [Source:HGNC Symbol;Acc:HGNC:12679]49290.087-0.2270No
8CCND1cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]CCND1
Entrez,  Source
cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]50030.078-0.2282No
9IRF6interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]IRF6
Entrez,  Source
interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]50800.069-0.2303No
10WNT5AWnt family member 5A [Source:HGNC Symbol;Acc:HGNC:12784]WNT5A
Entrez,  Source
Wnt family member 5A [Source:HGNC Symbol;Acc:HGNC:12784]53890.036-0.2526No
11WNT7BWnt family member 7B [Source:HGNC Symbol;Acc:HGNC:12787]WNT7B
Entrez,  Source
Wnt family member 7B [Source:HGNC Symbol;Acc:HGNC:12787]56800.007-0.2752No
12MED1mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]MED1
Entrez,  Source
mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]5899-0.004-0.2923No
13ETV4ETS variant transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:3493]ETV4
Entrez,  Source
ETS variant transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:3493]6052-0.018-0.3033No
14AKT1AKT serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:391]AKT1
Entrez,  Source
AKT serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:391]6248-0.032-0.3170No
15ORAI1ORAI calcium release-activated calcium modulator 1 [Source:HGNC Symbol;Acc:HGNC:25896]ORAI1
Entrez,  Source
ORAI calcium release-activated calcium modulator 1 [Source:HGNC Symbol;Acc:HGNC:25896]6703-0.082-0.3482No
16AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]AKT2
Entrez,  Source
AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]7107-0.129-0.3727No
17BTRCbeta-transducin repeat containing E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:1144]BTRC
Entrez,  Source
beta-transducin repeat containing E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:1144]7280-0.151-0.3776No
18EPHA2EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]EPHA2
Entrez,  Source
EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]7456-0.171-0.3816No
19CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]CSF1
Entrez,  Source
colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]7547-0.181-0.3782No
20LRP5LDL receptor related protein 5 [Source:HGNC Symbol;Acc:HGNC:6697]LRP5
Entrez,  Source
LDL receptor related protein 5 [Source:HGNC Symbol;Acc:HGNC:6697]8177-0.255-0.4133No
21JAK2Janus kinase 2 [Source:HGNC Symbol;Acc:HGNC:6192]JAK2
Entrez,  Source
Janus kinase 2 [Source:HGNC Symbol;Acc:HGNC:6192]9133-0.392-0.4664No
22HOXA5homeobox A5 [Source:HGNC Symbol;Acc:HGNC:5106]HOXA5
Entrez,  Source
homeobox A5 [Source:HGNC Symbol;Acc:HGNC:5106]10220-0.562-0.5200No
23CSF1Rcolony stimulating factor 1 receptor [Source:HGNC Symbol;Acc:HGNC:2433]CSF1R
Entrez,  Source
colony stimulating factor 1 receptor [Source:HGNC Symbol;Acc:HGNC:2433]11192-0.777-0.5520Yes
24PHB2prohibitin 2 [Source:HGNC Symbol;Acc:HGNC:30306]PHB2
Entrez,  Source
prohibitin 2 [Source:HGNC Symbol;Acc:HGNC:30306]11278-0.804-0.5121Yes
25TGFB1transforming growth factor beta 1 [Source:HGNC Symbol;Acc:HGNC:11766]TGFB1
Entrez,  Source
transforming growth factor beta 1 [Source:HGNC Symbol;Acc:HGNC:11766]11951-1.091-0.5021Yes
26MGMTO-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]MGMT
Entrez,  Source
O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]12012-1.129-0.4414Yes
27PMLpromyelocytic leukemia [Source:HGNC Symbol;Acc:HGNC:9113]PML
Entrez,  Source
promyelocytic leukemia [Source:HGNC Symbol;Acc:HGNC:9113]12094-1.182-0.3792Yes
28CEBPBCCAAT enhancer binding protein beta [Source:HGNC Symbol;Acc:HGNC:1834]CEBPB
Entrez,  Source
CCAAT enhancer binding protein beta [Source:HGNC Symbol;Acc:HGNC:1834]12268-1.320-0.3164Yes
29ID2inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]ID2
Entrez,  Source
inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]12273-1.322-0.2400Yes
30SRC"SRC proto-oncogene, non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11283]"SRC
Entrez,  Source
"SRC proto-oncogene, non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11283]"12336-1.387-0.1644Yes
31ZNF703zinc finger protein 703 [Source:HGNC Symbol;Acc:HGNC:25883]ZNF703
Entrez,  Source
zinc finger protein 703 [Source:HGNC Symbol;Acc:HGNC:25883]12446-1.565-0.0823Yes
32HIF1Ahypoxia inducible factor 1 subunit alpha [Source:HGNC Symbol;Acc:HGNC:4910]HIF1A
Entrez,  Source
hypoxia inducible factor 1 subunit alpha [Source:HGNC Symbol;Acc:HGNC:4910]12494-1.6670.0107Yes
Table: GSEA details [plain text format]



Fig 2: GO_MAMMARY_GLAND_EPITHELIUM_DEVELOPMENT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO_MAMMARY_GLAND_EPITHELIUM_DEVELOPMENT: Random ES distribution   
Gene set null distribution of ES for GO_MAMMARY_GLAND_EPITHELIUM_DEVELOPMENT